Yeah I forgot to mention the military vectors. That was extremely anti-climatic. When they shot Atlantis with those 3 big ass cannons, all that huge explosion did was shatter some rock. They then promptly got owned. I mean...wow, didn't see that one coming.

edit: And I just remembered how Apollo said he'll be back in another 12000 years. Why would that happen when there's nothing left to fight about? Everything has been resolved. Is it another reincarnation thing like in Xenogears?